Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869782.1_cds_XP_016433867.1_29982
CDS Infomation

[gene=LOC107760343] [db_xref=GeneID:107760343] [protein=RNA pseudouridine synthase 3, mitochondrial-like] [protein_id=XP_016433867.1] [location=join(170942..171268,172060..172122,172280..172438,172632..172679,172771..172851,173063..173179,173340..173441,173524..173682,174230..174610)] [gbkey=CDS]
Sequence

ATGAGGTGGGACAAAGATGTGAGTCGTTGCTTACTCTTTTTGGTCAGGCGCTACTCTAGA
TCTGTGGGCCATTCTGCATTAGCAAATCGTGGTCAACCTGTGATTCGAGTGTCAAACAGT
ATAACACATCTGGGCCGTCCAAAGGAGGGTGCAAAGCCTAGTCAGCTATTGTCTTTGCCC
CCATTTCCTGGCCATCCTTTGCTGGGAAAGAAAGCGGCCACCAGTCCTGACCAACCATCT
CGTCATGTTACTGCCATTAGCTGGATCAAATACTATTTTGATGAGATACCAGGCTCGGTC
ATCCAATCCCATTTTAATAAGGGTCTTGTTCAGTTAGAGTTTAATGAGTCATCTACAAGC
AAGGAAGGACAAACAAGATTGCTGAGAAAGATTAAGCATTCTGAGGTCATGGAAGTTGGT
GCAAGAGTTTATGTGCCCATATCTGTTGCTGAAACAAAAATCTCAAAACGATATGATGTT
ATACCTAGTGGCACTTTGTACCCCAATGCTGATGAGATAGCGTACTTGCAAAGGCTTGTA
TTTTACAAGGACCCTGCCTTAATTGTGCTAAACAAGCCCCCTAAACTGCCTGTGAAGGGA
AACCTTCCCGTGCATAATAGCATGGATGCCTTGGCAGCTGCAGCATTGTCCTATGAATAT
GACGAGGGTCCTAGGCTGGTACATCGTCTTGATAGAGAGAGCAGTGGCCTTCATTTAATG
GGAAGAACAGAAGAAAGTATCTCCCACCTTCATTTGTTGTTCAGCAACGCAAAAAGGTCC
AAGTCCCTGTCTAAGGCATGGAATGATGCATGTGGATCAACGTATCAGAGGTATTGGGCG
TTGGTAATAGGTTCCCCCAAGGAGAAGGAAGGCATAATCTCTGCACCACTTACAAAGGTG
CTTCTTGATGATGGTAGAACTGAGAGAGTCATGTTGGCTCAGCACTCAGGATTAGAAGCT
TCTGAGGAGGCTATTACAGAATATCGGTTGCTTGGTCCAATGATCAATGGATGCTCATGG
ATTGAGTTGCGCCCTCATACAAGTAGAAAACATCAGCTTCGAGTCCATTGTGCTGAAGCA
CTTGGAACTCCAATTGTGGGTGACTACAAATACGGTTGGTTTGTTCATCGGAAATGGAAG
CAGATGCCAAGAGTAGATGTTGAGCCGACAACAGGGAAACCCTACAGATTAAAGAGGCCG
GAAGGTTTGGATGTTCAGAAAGGAAGTGTCTTATCTAAGGTTCCTTTATTACATCTGCAT
TGTAGAGAGCTTGTGCTCCCAAACATTGCCAAGTTTATTGAGCTTCACAGTCGAAAAACA
AGAACTCGCTGTTTAAATGCAGATAATTGTTCAAAACCAGATCTCCTTCGGTTTGTAGCA
CCAATGCCATCTCATATGAAAATTAGTTGGAAGCTTATGTCCTCTTACTTGATATGA

Peptide Sequence

PEP ID

XP_016433867.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Nicotiana tabacum]
Sequence

MRWDKDVSRCLLFLVRRYSRSVGHSALANRGQPVIRVSNSITHLGRPKEGAKPSQLLSLP
PFPGHPLLGKKAATSPDQPSRHVTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNESSTS
KEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEIAYLQRLV
FYKDPALIVLNKPPKLPVKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLM
GRTEESISHLHLLFSNAKRSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGIISAPLTKV
LLDDGRTERVMLAQHSGLEASEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEA
LGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLH
CRELVLPNIAKFIELHSRKTRTRCLNADNCSKPDLLRFVAPMPSHMKISWKLMSSYLI

Transcript Sequence

Gene sequence data has not been registered.